Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm18353-201ENSMUST00000185906 784 ntBASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm42667-201ENSMUST00000196132 234 ntBASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm42525-201ENSMUST00000196257 527 ntBASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm43690-201ENSMUST00000201213 266 ntBASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 AC154747.2-201ENSMUST00000225109 780 ntBASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Npr3-204ENSMUST00000228489 1969 ntBASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ccdc38Q8CDN8 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm15572-201ENSMUST00000119248 593 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Snhg7-201ENSMUST00000181621 139 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm43553-201ENSMUST00000200900 685 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm46313-201ENSMUST00000220463 547 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm21941-201ENSMUST00000221121 562 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm10155-201ENSMUST00000084598 483 ntBASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ccdc38Q8CDN8 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 AC125487.1-201ENSMUST00000217888 1300 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm24335-201ENSMUST00000104211 132 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm11443-201ENSMUST00000118790 479 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm9378-201ENSMUST00000120315 471 ntBASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ccdc38Q8CDN8 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms