Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm15047-201ENSMUST00000118891 454 ntBASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm14531-201ENSMUST00000120845 285 ntBASIC11.11□□□□□ -0.63
Usp54Q8BL06 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ighv1-29-201ENSMUST00000194116 342 ntBASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm43287-201ENSMUST00000197747 600 ntBASIC11.11□□□□□ -0.63
Usp54Q8BL06 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm7972-201ENSMUST00000208434 1137 ntBASIC11.11□□□□□ -0.63
Usp54Q8BL06 AC102676.1-201ENSMUST00000228131 719 ntBASIC11.11□□□□□ -0.63
Usp54Q8BL06 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Gm4849-201ENSMUST00000188428 2246 ntBASIC11.11□□□□□ -0.63
Usp54Q8BL06 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Usp54Q8BL06 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Gm29761-201ENSMUST00000215964 1939 ntBASIC11.1□□□□□ -0.63
Usp54Q8BL06 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Gm20452-201ENSMUST00000174686 513 ntBASIC11.1□□□□□ -0.63
Usp54Q8BL06 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Gm44192-201ENSMUST00000204195 556 ntBASIC11.1□□□□□ -0.63
Usp54Q8BL06 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
Usp54Q8BL06 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Usp54Q8BL06 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm2735-201ENSMUST00000136133 277 ntBASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm37526-201ENSMUST00000194640 619 ntBASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm42767-201ENSMUST00000198583 632 ntBASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm8575-201ENSMUST00000210262 521 ntBASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm10043-201ENSMUST00000210691 235 ntBASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 AC151904.5-201ENSMUST00000218975 549 ntBASIC11.09□□□□□ -0.63
Usp54Q8BL06 AC110176.1-201ENSMUST00000226219 504 ntBASIC11.09□□□□□ -0.63
Usp54Q8BL06 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Usp54Q8BL06 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms