Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 AC107757.2-201ENSMUST00000226370 1466 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm14561-201ENSMUST00000117376 798 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm14143-201ENSMUST00000121686 357 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm25767-201ENSMUST00000158572 124 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm23823-201ENSMUST00000158740 124 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm6308-201ENSMUST00000203226 313 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Tssk4-203ENSMUST00000226497 1235 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Snora74a-201ENSMUST00000083715 196 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm22830-201ENSMUST00000083772 130 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm37258-201ENSMUST00000191734 1627 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.42□□□□□ -1.06
Trim43aQ3TL54 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim43aQ3TL54 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm5681-201ENSMUST00000189217 1533 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm3742-201ENSMUST00000220907 1391 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gzmk-202ENSMUST00000122399 1304 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm22426-201ENSMUST00000103811 96 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm15209-201ENSMUST00000117703 400 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm12917-201ENSMUST00000119850 639 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm17053-201ENSMUST00000163501 495 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm18988-201ENSMUST00000205601 746 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 AC211878.7-201ENSMUST00000222851 661 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm20302-201ENSMUST00000080671 275 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm25129-201ENSMUST00000082651 133 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms