Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Syngap1F6SEU4 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Syngap1F6SEU4 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Syngap1F6SEU4 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Syngap1F6SEU4 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Syngap1F6SEU4 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Syngap1F6SEU4 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Nedd4l-204ENSMUST00000224347 3150 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Rtl5-201ENSMUST00000113631 4653 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm12864-201ENSMUST00000122207 1006 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm23958-201ENSMUST00000157207 105 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm24994-201ENSMUST00000157414 121 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm9027-201ENSMUST00000165914 661 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC166358.1-201ENSMUST00000220677 105 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC153662.2-201ENSMUST00000221097 120 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC156037.2-201ENSMUST00000221284 112 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC166341.6-201ENSMUST00000221528 105 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 CT030242.1-201ENSMUST00000221945 125 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC124772.2-201ENSMUST00000222049 154 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC153663.1-201ENSMUST00000222165 120 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 CT030157.1-201ENSMUST00000222355 148 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC150661.2-201ENSMUST00000222418 105 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC127242.2-201ENSMUST00000223138 148 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Cthrc1-204ENSMUST00000226433 596 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm4849-201ENSMUST00000188428 2246 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Arpp21-221ENSMUST00000162065 2996 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 AC123832.1-201ENSMUST00000214120 2371 ntBASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Rbm43-202ENSMUST00000102768 2106 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Syngap1F6SEU4 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Rasgrp1-205ENSMUST00000173541 2283 ntTSL 5 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm37699-201ENSMUST00000194753 3338 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Pla2g4c-203ENSMUST00000108528 3390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm12310-201ENSMUST00000118013 492 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm13500-201ENSMUST00000119348 824 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm28239-201ENSMUST00000190225 447 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Ighv8-15-201ENSMUST00000197770 294 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm8479-201ENSMUST00000203825 718 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm45674-201ENSMUST00000210043 450 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm33096-201ENSMUST00000210189 493 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 AC154838.3-201ENSMUST00000228876 965 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm6436-201ENSMUST00000077163 451 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm18639-201ENSMUST00000210442 1769 ntBASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Syngap1F6SEU4 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms