Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm28724-201ENSMUST00000186149 625 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Gm8010-201ENSMUST00000194128 873 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Gm17935-201ENSMUST00000196649 772 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Gm44018-201ENSMUST00000204471 407 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Gm2734-201ENSMUST00000208561 743 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 AC130673.2-201ENSMUST00000228091 797 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Ucn2-201ENSMUST00000052724 1155 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Gm23970-201ENSMUST00000083319 107 ntBASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Pilrb1-206ENSMUST00000199387 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube3bQ9ES34 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm8049-201ENSMUST00000214336 1782 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm37675-201ENSMUST00000192303 2847 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm5120-201ENSMUST00000215231 2414 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 AC120425.1-201ENSMUST00000225213 2360 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm12883-201ENSMUST00000117867 364 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm15712-201ENSMUST00000120369 1156 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm12180-201ENSMUST00000120905 661 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm14463-201ENSMUST00000121117 498 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm24382-201ENSMUST00000122698 107 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm4831-201ENSMUST00000174626 594 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm9142-201ENSMUST00000187161 955 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm43711-201ENSMUST00000195994 373 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm43012-201ENSMUST00000198569 937 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm43659-201ENSMUST00000200894 628 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 AC138284.2-201ENSMUST00000213982 567 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 AC133183.2-201ENSMUST00000221543 280 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm5374-201ENSMUST00000222868 657 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 AC114916.1-201ENSMUST00000228465 494 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm21957-201ENSMUST00000073056 438 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm23423-201ENSMUST00000082782 106 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Gm45294-201ENSMUST00000210685 2102 ntBASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube3bQ9ES34 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms