Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Rab3gap1-201ENSMUST00000037649 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm25164-201ENSMUST00000158908 116 ntBASIC7.75□□□□□ -1.17
Cdh23Q99PF4 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm7115-201ENSMUST00000193706 832 ntBASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 AV026068-229ENSMUST00000225516 595 ntBASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm43800-201ENSMUST00000201868 2731 ntBASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm43910-201ENSMUST00000204561 3241 ntBASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Cdh23Q99PF4 Gm17170-201ENSMUST00000112785 316 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm23768-201ENSMUST00000104440 131 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm16138-201ENSMUST00000159341 821 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm27030-201ENSMUST00000182551 464 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm34701-201ENSMUST00000204213 849 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Gm10221-201ENSMUST00000088299 309 ntBASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Cdh23Q99PF4 9930024M15Rik-201ENSMUST00000214902 2584 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm9144-201ENSMUST00000101625 1008 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm27653-201ENSMUST00000185037 136 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm27350-201ENSMUST00000185109 98 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm7804-202ENSMUST00000194187 854 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm23734-201ENSMUST00000083753 109 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms