Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm44561-201ENSMUST00000208869 264 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 CT025630.3-201ENSMUST00000228798 835 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 n-R5s156-201ENSMUST00000083377 105 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm37570-201ENSMUST00000195411 3106 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm37499-201ENSMUST00000194683 3478 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 CT009515.4-201ENSMUST00000228165 1494 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm25721-201ENSMUST00000157496 171 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm26197-201ENSMUST00000175033 115 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Ighv1-38-201ENSMUST00000192755 349 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm17835-201ENSMUST00000196870 499 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm42696-201ENSMUST00000199859 1142 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm39121-201ENSMUST00000208847 525 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm5948-201ENSMUST00000219627 839 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm5789-201ENSMUST00000222643 865 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 AC165260.3-201ENSMUST00000225101 665 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm37258-201ENSMUST00000191734 1627 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm38110-201ENSMUST00000194594 1551 ntBASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nup88Q8CEC0 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm38339-201ENSMUST00000195479 1829 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm17229-202ENSMUST00000166792 1753 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm14032-201ENSMUST00000117686 1026 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm12599-201ENSMUST00000120534 792 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm12178-201ENSMUST00000120545 330 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm8065-201ENSMUST00000164048 605 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm38328-201ENSMUST00000195582 317 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Mir185-201ENSMUST00000083530 65 ntBASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Rpl7l1-201ENSMUST00000078286 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nup88Q8CEC0 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC9.4□□□□□ -0.91
Nup88Q8CEC0 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Nup88Q8CEC0 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Nup88Q8CEC0 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Nup88Q8CEC0 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms