Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm15192-201ENSMUST00000121005 293 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm371-201ENSMUST00000142240 1245 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm7707-201ENSMUST00000165950 1156 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 n-R5s115-201ENSMUST00000179019 119 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm5327-201ENSMUST00000182864 1009 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm8167-201ENSMUST00000183320 958 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm17867-201ENSMUST00000188981 391 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm28864-201ENSMUST00000189251 644 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Olfr471-201ENSMUST00000210091 936 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm45299-201ENSMUST00000210199 420 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 n-R5s193-201ENSMUST00000082864 109 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Vps54Q5SPW0 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.52□□□□□ -0.89
Vps54Q5SPW0 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm24071-201ENSMUST00000104520 132 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm13649-201ENSMUST00000122325 606 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm5973-201ENSMUST00000178542 496 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm29126-201ENSMUST00000188686 151 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm29144-201ENSMUST00000189235 339 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm29238-201ENSMUST00000189709 695 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm28607-201ENSMUST00000190142 339 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm28121-201ENSMUST00000191420 339 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Ighv1-38-201ENSMUST00000192755 349 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm26413-202ENSMUST00000198972 127 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm4898-201ENSMUST00000218519 832 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 AC102689.1-201ENSMUST00000220511 1090 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm5386-201ENSMUST00000121749 2450 ntBASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Vps54Q5SPW0 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm23706-201ENSMUST00000104369 82 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm12297-201ENSMUST00000121380 979 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm15730-201ENSMUST00000121828 415 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm12967-201ENSMUST00000122147 289 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm22670-201ENSMUST00000158724 143 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm7162-201ENSMUST00000161205 1024 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Mir7115-201ENSMUST00000184275 64 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Mir1897-202ENSMUST00000198006 79 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm42767-201ENSMUST00000198583 632 ntBASIC9.5□□□□□ -0.89
Vps54Q5SPW0 Gm34701-201ENSMUST00000204213 849 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms