Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Tmx2-201ENSMUST00000053664 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 CT009757.2-201ENSMUST00000220806 2028 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Zic3-203ENSMUST00000088631 2980 ntTSL 5 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm22438-201ENSMUST00000104049 132 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm9378-201ENSMUST00000120315 471 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm13726-201ENSMUST00000121278 794 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm14728-201ENSMUST00000122196 492 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm24057-201ENSMUST00000158616 302 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm26929-201ENSMUST00000182703 753 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm27435-201ENSMUST00000183588 88 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm43396-201ENSMUST00000197506 706 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 AC166822.1-201ENSMUST00000227667 636 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gm45793-201ENSMUST00000207900 1342 ntBASIC10.46□□□□□ -0.73
Sf3b2Q3UJB0 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Stn1-207ENSMUST00000182808 1618 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Cldn34c1-202ENSMUST00000113348 3281 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Rhbdd1-201ENSMUST00000027322 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sf3b2Q3UJB0 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm43336-201ENSMUST00000200487 4504 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 C79130-201ENSMUST00000199610 4296 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Tgfb1i1-204ENSMUST00000164710 3788 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm42811-201ENSMUST00000201951 2768 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Tbccd1-201ENSMUST00000004576 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm43420-201ENSMUST00000198012 1857 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm44792-201ENSMUST00000207008 1628 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm44834-201ENSMUST00000206671 1396 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm11263-201ENSMUST00000121853 749 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm5973-201ENSMUST00000178542 496 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm20072-201ENSMUST00000202231 292 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 AC154747.4-201ENSMUST00000224802 903 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Gm25926-201ENSMUST00000082899 160 ntBASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b2Q3UJB0 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms