Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm42766-201ENSMUST00000200233 1332 ntBASIC8.45□□□□□ -1.06
Trim43aQ3TL54 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim43aQ3TL54 Gm2098-201ENSMUST00000189146 1763 ntBASIC8.45□□□□□ -1.06
Trim43aQ3TL54 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim43aQ3TL54 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim43aQ3TL54 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim43aQ3TL54 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim43aQ3TL54 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm7645-201ENSMUST00000119008 788 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm12959-201ENSMUST00000119396 403 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm14746-201ENSMUST00000120309 741 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 1110059E24Rik-202ENSMUST00000177577 599 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm7577-201ENSMUST00000182543 982 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm5696-201ENSMUST00000189850 552 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm38051-201ENSMUST00000193740 433 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Igkv12-42-201ENSMUST00000198769 327 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm7565-201ENSMUST00000203611 623 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm18973-201ENSMUST00000205814 511 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm8948-201ENSMUST00000216371 370 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 AC162940.1-201ENSMUST00000224745 1167 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 AC122774.1-201ENSMUST00000227703 762 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 CT025630.3-201ENSMUST00000228798 835 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm4825-201ENSMUST00000079690 408 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm16026-201ENSMUST00000094774 580 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm15433-201ENSMUST00000097671 891 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.44□□□□□ -1.06
Trim43aQ3TL54 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm29113-201ENSMUST00000185991 3432 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm25502-201ENSMUST00000104428 131 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm25232-201ENSMUST00000104502 132 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm13252-201ENSMUST00000119355 321 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 n-R5s76-201ENSMUST00000122700 113 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm17235-201ENSMUST00000169128 964 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm17572-201ENSMUST00000171455 420 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm37904-201ENSMUST00000195591 312 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm2566-201ENSMUST00000201267 431 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Gm8952-201ENSMUST00000206828 1102 ntBASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Btg1-ps2-201ENSMUST00000089060 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim43aQ3TL54 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms