Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AC116596.2-201ENSMUST00000226642 526 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm37206-201ENSMUST00000195512 3069 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm33167-201ENSMUST00000201933 2643 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm12919-201ENSMUST00000119855 1594 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm37200-201ENSMUST00000193689 2172 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm37541-201ENSMUST00000192464 2315 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm43980-201ENSMUST00000204899 1612 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Ighv1-55-201ENSMUST00000103526 415 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm4919-201ENSMUST00000117825 604 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm12361-201ENSMUST00000119806 1044 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm14186-201ENSMUST00000120804 137 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm13576-201ENSMUST00000120851 778 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 1110059E24Rik-202ENSMUST00000177577 599 ntTSL 3 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm7577-201ENSMUST00000182543 982 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC9.03□□□□□ -0.96
Hmgb1P63158 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm5066-201ENSMUST00000188479 822 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm37966-201ENSMUST00000193122 326 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm7442-201ENSMUST00000197778 383 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Igkv12-42-201ENSMUST00000198769 327 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm23786-202ENSMUST00000200181 119 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Lyrm1-207ENSMUST00000208202 936 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm6579-201ENSMUST00000208224 865 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 AC165157.2-201ENSMUST00000222265 367 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 AC211878.7-201ENSMUST00000222851 661 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Hmgb1P63158 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Mbnl2-203ENSMUST00000226800 3328 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gm37066-201ENSMUST00000192713 2061 ntBASIC9.03□□□□□ -0.96
Hmgb1P63158 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Hmgb1P63158 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Hmgb1P63158 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Hmgb1P63158 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Hmgb1P63158 2310015K22Rik-201ENSMUST00000191452 1461 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Hmgb1P63158 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Hmgb1P63158 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hmgb1P63158 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hmgb1P63158 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Hmgb1P63158 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm20501-202ENSMUST00000211303 2194 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.02□□□□□ -0.97
Hmgb1P63158 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Hmgb1P63158 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Hmgb1P63158 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm26209-201ENSMUST00000103852 110 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm14756-201ENSMUST00000116395 240 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm12142-201ENSMUST00000117114 485 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm14427-201ENSMUST00000117183 635 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms