Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RxraP28700 Gm25762-201ENSMUST00000103984 132 ntBASIC8.06□□□□□ -1.12
RxraP28700 Gm4773-201ENSMUST00000120392 702 ntBASIC8.06□□□□□ -1.12
RxraP28700 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC8.06□□□□□ -1.12
RxraP28700 Gm13740-201ENSMUST00000120590 310 ntBASIC8.06□□□□□ -1.12
RxraP28700 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Gm22132-201ENSMUST00000175316 100 ntBASIC8.06□□□□□ -1.12
RxraP28700 Mir3085-201ENSMUST00000175493 89 ntBASIC8.06□□□□□ -1.12
RxraP28700 Gm25442-201ENSMUST00000177270 92 ntBASIC8.06□□□□□ -1.12
RxraP28700 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC8.06□□□□□ -1.12
RxraP28700 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.06□□□□□ -1.12
RxraP28700 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Gm4178-201ENSMUST00000218307 649 ntBASIC8.06□□□□□ -1.12
RxraP28700 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC8.06□□□□□ -1.12
RxraP28700 Gm35412-201ENSMUST00000220437 999 ntBASIC8.06□□□□□ -1.12
RxraP28700 AC163038.1-201ENSMUST00000223632 1142 ntBASIC8.06□□□□□ -1.12
RxraP28700 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC8.06□□□□□ -1.12
RxraP28700 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.06□□□□□ -1.12
RxraP28700 AC100209.1-201ENSMUST00000225562 409 ntBASIC8.06□□□□□ -1.12
RxraP28700 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RxraP28700 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RxraP28700 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RxraP28700 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RxraP28700 Gm37334-201ENSMUST00000192325 2938 ntBASIC8.06□□□□□ -1.12
RxraP28700 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Gm2098-201ENSMUST00000189146 1763 ntBASIC8.06□□□□□ -1.12
RxraP28700 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.06□□□□□ -1.12
RxraP28700 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
RxraP28700 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm43544-201ENSMUST00000196474 2472 ntBASIC8.06□□□□□ -1.12
RxraP28700 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC8.05□□□□□ -1.12
RxraP28700 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.05□□□□□ -1.12
RxraP28700 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
RxraP28700 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
RxraP28700 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC8.05□□□□□ -1.12
RxraP28700 Gm43980-201ENSMUST00000204899 1612 ntBASIC8.05□□□□□ -1.12
RxraP28700 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Gm4919-201ENSMUST00000117825 604 ntBASIC8.05□□□□□ -1.12
RxraP28700 Gm11220-201ENSMUST00000118844 475 ntBASIC8.05□□□□□ -1.12
RxraP28700 n-R5s76-201ENSMUST00000122700 113 ntBASIC8.05□□□□□ -1.12
RxraP28700 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC8.05□□□□□ -1.12
RxraP28700 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Gm17235-201ENSMUST00000169128 964 ntBASIC8.05□□□□□ -1.12
RxraP28700 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.05□□□□□ -1.12
RxraP28700 Gm7734-201ENSMUST00000182832 1011 ntBASIC8.05□□□□□ -1.12
RxraP28700 Calm5-201ENSMUST00000183198 589 ntBASIC8.05□□□□□ -1.12
RxraP28700 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 Trav22-201ENSMUST00000198117 346 ntBASIC8.05□□□□□ -1.12
RxraP28700 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC8.05□□□□□ -1.12
RxraP28700 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC8.05□□□□□ -1.12
RxraP28700 Gm42402-201ENSMUST00000208341 1054 ntBASIC8.05□□□□□ -1.12
RxraP28700 Gm45889-201ENSMUST00000209535 1057 ntBASIC8.05□□□□□ -1.12
RxraP28700 AC119987.1-201ENSMUST00000212316 848 ntBASIC8.05□□□□□ -1.12
RxraP28700 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RxraP28700 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.05□□□□□ -1.12
RxraP28700 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.05□□□□□ -1.12
RxraP28700 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms