Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
P20040 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
P20040 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC7.08□□□□□ -1.28
P20040 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
P20040 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
P20040 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
P20040 Gm11443-201ENSMUST00000118790 479 ntBASIC7.08□□□□□ -1.28
P20040 Gm11220-201ENSMUST00000118844 475 ntBASIC7.08□□□□□ -1.28
P20040 Gm9378-201ENSMUST00000120315 471 ntBASIC7.08□□□□□ -1.28
P20040 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC7.08□□□□□ -1.28
P20040 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.08□□□□□ -1.28
P20040 Gm26184-201ENSMUST00000157686 131 ntBASIC7.08□□□□□ -1.28
P20040 Gm24004-201ENSMUST00000158460 178 ntBASIC7.08□□□□□ -1.28
P20040 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
P20040 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.08□□□□□ -1.28
P20040 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Gm6394-201ENSMUST00000197077 477 ntBASIC7.08□□□□□ -1.28
P20040 Gm6308-201ENSMUST00000203226 313 ntBASIC7.08□□□□□ -1.28
P20040 Gm5609-201ENSMUST00000210008 1267 ntBASIC7.08□□□□□ -1.28
P20040 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC7.08□□□□□ -1.28
P20040 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 AC147044.1-201ENSMUST00000223850 552 ntBASIC7.08□□□□□ -1.28
P20040 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.08□□□□□ -1.28
P20040 Gm5590-201ENSMUST00000059110 345 ntBASIC7.08□□□□□ -1.28
P20040 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC7.08□□□□□ -1.28
P20040 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
P20040 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
P20040 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Phc3-202ENSMUST00000064718 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Gm7203-201ENSMUST00000210880 1404 ntBASIC7.08□□□□□ -1.28
P20040 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Pilrb2-201ENSMUST00000164886 1807 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Gm6418-201ENSMUST00000118325 3577 ntBASIC7.08□□□□□ -1.28
P20040 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
P20040 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
P20040 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.07□□□□□ -1.28
P20040 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
P20040 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
P20040 Gm5915-201ENSMUST00000116136 454 ntBASIC7.07□□□□□ -1.28
P20040 Gm7910-201ENSMUST00000117896 835 ntBASIC7.07□□□□□ -1.28
P20040 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Gm17157-201ENSMUST00000172397 348 ntBASIC7.07□□□□□ -1.28
P20040 Mir7060-201ENSMUST00000183486 137 ntBASIC7.07□□□□□ -1.28
P20040 Mir6930-201ENSMUST00000183859 68 ntBASIC7.07□□□□□ -1.28
P20040 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
P20040 Gm5708-201ENSMUST00000196289 886 ntBASIC7.07□□□□□ -1.28
P20040 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC7.07□□□□□ -1.28
P20040 Gm43553-201ENSMUST00000200900 685 ntBASIC7.07□□□□□ -1.28
P20040 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
P20040 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
P20040 AC153864.1-201ENSMUST00000218482 523 ntBASIC7.07□□□□□ -1.28
P20040 AC132468.1-201ENSMUST00000224706 499 ntBASIC7.07□□□□□ -1.28
P20040 AC123738.1-201ENSMUST00000224796 773 ntBASIC7.07□□□□□ -1.28
P20040 CT025630.3-201ENSMUST00000228798 835 ntBASIC7.07□□□□□ -1.28
P20040 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
P20040 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms