Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm11348-201ENSMUST00000118813 318 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm15702-201ENSMUST00000119680 444 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm11585-201ENSMUST00000120901 569 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm12180-201ENSMUST00000120905 661 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm8407-201ENSMUST00000192719 427 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm45074-201ENSMUST00000209091 1240 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 AC132304.1-201ENSMUST00000218860 135 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Klk1b1-201ENSMUST00000078835 867 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 AC160138.2-201ENSMUST00000220255 1531 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm43196-201ENSMUST00000201762 2114 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm45807-201ENSMUST00000209142 2874 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm12142-201ENSMUST00000117114 485 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm10651-201ENSMUST00000118212 609 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm11621-201ENSMUST00000118253 589 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC6.44□□□□□ -1.38
Hmgb3O54879 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm13997-201ENSMUST00000155641 336 ntTSL 3 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Hmgb3O54879 4930579G18Rik-201ENSMUST00000167763 968 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm17069-201ENSMUST00000172256 490 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm23563-201ENSMUST00000174900 251 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm7132-201ENSMUST00000182302 984 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm27283-201ENSMUST00000184853 323 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm20936-201ENSMUST00000191049 658 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm19148-201ENSMUST00000197045 429 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Ighv1-65-201ENSMUST00000198790 349 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm44790-201ENSMUST00000204137 798 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm8767-201ENSMUST00000215786 1070 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 AC126805.1-201ENSMUST00000225142 262 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 AC192434.1-201ENSMUST00000225464 390 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm14267-205ENSMUST00000226697 1299 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 AC137117.2-201ENSMUST00000228560 282 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms