Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Col4a6B1AVK5 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.09□□□□□ -1.12
Col4a6B1AVK5 Dopey2-207ENSMUST00000227156 7340 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm11903-201ENSMUST00000118958 727 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm13545-201ENSMUST00000119044 482 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm37841-201ENSMUST00000195367 376 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm43396-201ENSMUST00000197506 706 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm45100-201ENSMUST00000209153 391 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm23054-201ENSMUST00000082804 162 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Abca8a-204ENSMUST00000106664 5617 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm42656-201ENSMUST00000201506 2305 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm11371-201ENSMUST00000120294 385 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm15644-201ENSMUST00000121764 387 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm27684-201ENSMUST00000183778 80 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a6B1AVK5 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm37536-201ENSMUST00000194710 2491 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm43589-201ENSMUST00000199400 1523 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm37960-201ENSMUST00000192402 1897 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Sez6l2-203ENSMUST00000106335 3732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm23437-201ENSMUST00000104036 127 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm11880-201ENSMUST00000117612 399 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm12174-201ENSMUST00000119853 813 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm15192-201ENSMUST00000121005 293 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm23888-201ENSMUST00000122690 253 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms