Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm18697-201ENSMUST00000191179 2126 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm16409-201ENSMUST00000100510 747 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm26469-201ENSMUST00000116765 121 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm5406-201ENSMUST00000120054 766 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm9143-201ENSMUST00000120745 745 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm8172-201ENSMUST00000120762 750 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm12180-201ENSMUST00000120905 661 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm11933-201ENSMUST00000121550 375 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm25320-201ENSMUST00000122551 324 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm18828-201ENSMUST00000180475 857 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm42584-201ENSMUST00000201404 220 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm18402-201ENSMUST00000203834 586 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm45712-201ENSMUST00000212417 335 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 CT025561.1-201ENSMUST00000214972 674 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm46313-201ENSMUST00000220463 547 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 AC154760.1-201ENSMUST00000227218 673 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm22748-201ENSMUST00000082493 136 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Gm37663-201ENSMUST00000191887 2299 ntBASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup88Q8CEC0 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm17821-201ENSMUST00000223448 1693 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm37893-201ENSMUST00000192826 2437 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm10651-201ENSMUST00000118212 609 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Gm8974-201ENSMUST00000175770 479 ntBASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup88Q8CEC0 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms