Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm6418-201ENSMUST00000118325 3577 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm6181-201ENSMUST00000117187 264 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm8832-201ENSMUST00000119890 395 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm11676-201ENSMUST00000120443 490 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm29651-201ENSMUST00000189088 697 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm29144-201ENSMUST00000189235 339 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm29238-201ENSMUST00000189709 695 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm5696-201ENSMUST00000189850 552 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm28607-201ENSMUST00000190142 339 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm20802-201ENSMUST00000190832 698 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm28121-201ENSMUST00000191420 339 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm42402-201ENSMUST00000208341 1054 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm30619-201ENSMUST00000213962 686 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm18504-201ENSMUST00000220917 929 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm18030-201ENSMUST00000222163 731 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 AC160930.2-201ENSMUST00000226608 303 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm3742-201ENSMUST00000220907 1391 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm45088-201ENSMUST00000207066 1408 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm45832-201ENSMUST00000212762 1443 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 AC122426.1-201ENSMUST00000214736 2235 ntBASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Ccdc38Q8CDN8 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm26012-201ENSMUST00000104411 128 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 n-R5s51-201ENSMUST00000104473 123 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm26429-201ENSMUST00000104829 110 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm11649-201ENSMUST00000118214 375 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm9516-201ENSMUST00000119684 424 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm11765-201ENSMUST00000121173 1205 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm16585-201ENSMUST00000161442 610 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm18301-201ENSMUST00000185261 888 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm29548-201ENSMUST00000187012 694 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm28105-201ENSMUST00000187788 694 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm29145-201ENSMUST00000189914 456 ntBASIC8.94□□□□□ -0.98
Ccdc38Q8CDN8 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms