Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AC139758.2-201ENSMUST00000228380 529 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm42766-201ENSMUST00000200233 1332 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm24541-201ENSMUST00000103871 96 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm13005-201ENSMUST00000119518 585 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm15646-201ENSMUST00000143317 766 ntTSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm23082-201ENSMUST00000157852 133 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm25551-201ENSMUST00000158082 103 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm45674-201ENSMUST00000210043 450 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Dppa5b-201ENSMUST00000214261 348 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Dppa5c-201ENSMUST00000216268 348 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 AC126691.2-201ENSMUST00000226185 249 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 AC146601.1-201ENSMUST00000227910 905 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Snora65-201ENSMUST00000083190 130 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Mir412-201ENSMUST00000083636 80 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm9030-201ENSMUST00000218405 2410 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm9029-201ENSMUST00000219232 2410 ntBASIC9.05□□□□□ -0.96
Hmgb1P63158 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Zfp180-202ENSMUST00000203854 3845 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Hmgb1P63158 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Hmgb1P63158 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Hmgb1P63158 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 BC055308-201ENSMUST00000193380 2538 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Hmgb1P63158 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm21051-201ENSMUST00000221757 1688 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm14561-201ENSMUST00000117376 798 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm12180-201ENSMUST00000120905 661 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm9381-201ENSMUST00000182285 1012 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm19148-201ENSMUST00000197045 429 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm43895-201ENSMUST00000203219 855 ntBASIC9.04□□□□□ -0.96
Hmgb1P63158 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC9.04□□□□□ -0.96
Hmgb1P63158 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC9.04□□□□□ -0.96
Hmgb1P63158 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms