Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
RxraP28700 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Gm23958-201ENSMUST00000157207 105 ntBASIC8.08□□□□□ -1.12
RxraP28700 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.08□□□□□ -1.12
RxraP28700 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC8.08□□□□□ -1.12
RxraP28700 Gm8407-201ENSMUST00000192719 427 ntBASIC8.08□□□□□ -1.12
RxraP28700 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC8.08□□□□□ -1.12
RxraP28700 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC8.08□□□□□ -1.12
RxraP28700 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC8.08□□□□□ -1.12
RxraP28700 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC8.08□□□□□ -1.12
RxraP28700 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC8.08□□□□□ -1.12
RxraP28700 AC130829.2-201ENSMUST00000222931 127 ntBASIC8.08□□□□□ -1.12
RxraP28700 AC126805.1-201ENSMUST00000225142 262 ntBASIC8.08□□□□□ -1.12
RxraP28700 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Snora57-201ENSMUST00000093658 148 ntBASIC8.08□□□□□ -1.12
RxraP28700 Gm15433-201ENSMUST00000097671 891 ntBASIC8.08□□□□□ -1.12
RxraP28700 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.08□□□□□ -1.12
RxraP28700 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC8.08□□□□□ -1.12
RxraP28700 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.08□□□□□ -1.12
RxraP28700 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Zfp939-201ENSMUST00000061201 2131 ntBASIC8.08□□□□□ -1.12
RxraP28700 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RxraP28700 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RxraP28700 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RxraP28700 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.07□□□□□ -1.12
RxraP28700 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
RxraP28700 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
RxraP28700 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC8.07□□□□□ -1.12
RxraP28700 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC8.07□□□□□ -1.12
RxraP28700 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC8.07□□□□□ -1.12
RxraP28700 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RxraP28700 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RxraP28700 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Gm29471-201ENSMUST00000190527 700 ntBASIC8.07□□□□□ -1.12
RxraP28700 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC8.07□□□□□ -1.12
RxraP28700 Gm42525-201ENSMUST00000196257 527 ntBASIC8.07□□□□□ -1.12
RxraP28700 Gm9729-201ENSMUST00000196364 265 ntBASIC8.07□□□□□ -1.12
RxraP28700 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RxraP28700 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.07□□□□□ -1.12
RxraP28700 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC8.07□□□□□ -1.12
RxraP28700 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC8.07□□□□□ -1.12
RxraP28700 Gm45834-201ENSMUST00000212445 454 ntBASIC8.07□□□□□ -1.12
RxraP28700 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC8.07□□□□□ -1.12
RxraP28700 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 AC144783.1-201ENSMUST00000219103 960 ntBASIC8.07□□□□□ -1.12
RxraP28700 AC132384.1-201ENSMUST00000219908 1195 ntBASIC8.07□□□□□ -1.12
RxraP28700 CT033774.2-201ENSMUST00000222079 256 ntBASIC8.07□□□□□ -1.12
RxraP28700 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RxraP28700 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Gm21957-201ENSMUST00000073056 438 ntBASIC8.07□□□□□ -1.12
RxraP28700 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
RxraP28700 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.07□□□□□ -1.12
RxraP28700 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
RxraP28700 Gm17821-201ENSMUST00000223448 1693 ntBASIC8.07□□□□□ -1.12
RxraP28700 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
RxraP28700 Gm17137-201ENSMUST00000164106 4371 ntBASIC8.07□□□□□ -1.12
RxraP28700 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Gm44746-201ENSMUST00000205565 1349 ntBASIC8.06□□□□□ -1.12
RxraP28700 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Gm42981-201ENSMUST00000200184 3252 ntBASIC8.06□□□□□ -1.12
RxraP28700 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RxraP28700 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
RxraP28700 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RxraP28700 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms