Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm42804-201ENSMUST00000199701 178 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm43709-201ENSMUST00000199870 559 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm9419-201ENSMUST00000200672 567 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm43371-201ENSMUST00000202838 1031 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 AC155941.3-201ENSMUST00000218476 308 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 AC139381.1-201ENSMUST00000224215 478 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 CT009515.2-201ENSMUST00000226126 736 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm14267-208ENSMUST00000228324 1189 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 CT025630.3-201ENSMUST00000228798 835 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Lrrc49-202ENSMUST00000065603 3017 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm12430-201ENSMUST00000121539 1322 ntBASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Syngap1F6SEU4 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Mrpl48-201ENSMUST00000064334 1865 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Mageb2-202ENSMUST00000201779 1551 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm12535-201ENSMUST00000121025 484 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm7599-201ENSMUST00000121453 796 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm11440-201ENSMUST00000121509 527 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm12163-201ENSMUST00000121597 389 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm37191-201ENSMUST00000193346 388 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm18988-201ENSMUST00000205601 746 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 AC167019.4-201ENSMUST00000226494 1070 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm7086-202ENSMUST00000228849 506 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm4149-201ENSMUST00000099371 276 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Rpap3-ps2-201ENSMUST00000184741 2161 ntBASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Ncam1-202ENSMUST00000166811 3088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Syngap1F6SEU4 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.95
Syngap1F6SEU4 Gm43839-201ENSMUST00000196183 2325 ntBASIC9.14□□□□□ -0.95
Syngap1F6SEU4 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Syngap1F6SEU4 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Syngap1F6SEU4 Gm43071-201ENSMUST00000197233 2032 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 451.7 ms