Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC123058.1-201ENSMUST00000223748 437 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm16487-201ENSMUST00000105048 4037 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 AC162467.2-201ENSMUST00000219397 2571 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm25761-201ENSMUST00000103983 128 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm20396-201ENSMUST00000173358 745 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm27288-201ENSMUST00000184215 80 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm27597-201ENSMUST00000184365 80 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm27506-201ENSMUST00000184558 80 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Mir7029-201ENSMUST00000184777 61 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm27529-201ENSMUST00000184975 80 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm27907-201ENSMUST00000185101 80 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm17970-201ENSMUST00000192199 685 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm42525-201ENSMUST00000196257 527 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm8896-201ENSMUST00000197434 1106 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm43694-201ENSMUST00000200773 1119 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm42887-201ENSMUST00000202469 1119 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm6308-201ENSMUST00000203226 313 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm44285-201ENSMUST00000203557 940 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 AC158531.2-201ENSMUST00000224264 473 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 AC110236.1-201ENSMUST00000227807 527 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm43686-201ENSMUST00000197351 2439 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm43589-201ENSMUST00000199400 1523 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nup88Q8CEC0 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm37109-201ENSMUST00000195475 2254 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Phc3-202ENSMUST00000064718 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm26429-201ENSMUST00000104829 110 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm14056-201ENSMUST00000117198 642 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm9164-201ENSMUST00000118700 1014 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm24050-201ENSMUST00000158623 290 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm4246-201ENSMUST00000172822 216 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Mir1231-201ENSMUST00000175639 81 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm18349-201ENSMUST00000187440 904 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm28530-201ENSMUST00000190473 577 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm43461-201ENSMUST00000202351 996 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm45166-201ENSMUST00000209073 683 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm9689-201ENSMUST00000210009 428 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 AC159263.2-201ENSMUST00000221593 411 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 CT033774.2-201ENSMUST00000222079 256 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm7493-201ENSMUST00000085919 626 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Zfp939-201ENSMUST00000061201 2131 ntBASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup88Q8CEC0 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms