Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 AC122533.2-201ENSMUST00000223772 545 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm8394-201ENSMUST00000079684 952 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm5681-201ENSMUST00000189217 1533 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm28720-201ENSMUST00000190728 3156 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm16276-201ENSMUST00000131218 262 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm17235-201ENSMUST00000169128 964 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm3275-201ENSMUST00000169145 487 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm37450-201ENSMUST00000195218 170 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm45401-201ENSMUST00000209456 733 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm46995-201ENSMUST00000223445 1378 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 AC123665.5-201ENSMUST00000226648 1392 ntBASIC8.97□□□□□ -0.97
Ccdc38Q8CDN8 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.96□□□□□ -0.97
Ccdc38Q8CDN8 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm11348-201ENSMUST00000118813 318 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm15192-201ENSMUST00000121005 293 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm23413-201ENSMUST00000175521 125 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm42760-201ENSMUST00000199814 311 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 AC134917.3-201ENSMUST00000222057 1283 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Gm9105-201ENSMUST00000120160 1398 ntBASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Ccdc38Q8CDN8 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms