Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm24893-201ENSMUST00000122745 369 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm36961-201ENSMUST00000191980 132 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm42760-201ENSMUST00000199814 311 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm6887-201ENSMUST00000080945 482 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm38249-201ENSMUST00000192560 2321 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 AC093043.2-201ENSMUST00000228616 2017 ntBASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Cdh5-201ENSMUST00000034339 3995 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col4a6B1AVK5 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm23007-201ENSMUST00000158951 177 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Mir6244-201ENSMUST00000184156 117 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Dgcr2-202ENSMUST00000066127 3790 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm11298-201ENSMUST00000120503 1799 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm44802-201ENSMUST00000208026 1916 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm15105-201ENSMUST00000117777 204 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm12929-201ENSMUST00000122406 370 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm9274-201ENSMUST00000182505 984 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm9114-201ENSMUST00000188558 997 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm38079-201ENSMUST00000195603 154 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm8168-201ENSMUST00000209631 948 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms