Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm18779-201ENSMUST00000173444 577 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Mir7060-201ENSMUST00000183486 137 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 AC147044.1-201ENSMUST00000223850 552 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 AC116487.1-201ENSMUST00000227033 339 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Fabp5l2-201ENSMUST00000072582 408 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm5605-201ENSMUST00000208940 1305 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Nup88Q8CEC0 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Pilrb1-206ENSMUST00000199387 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm26344-201ENSMUST00000104553 132 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm11954-201ENSMUST00000121403 349 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm9399-201ENSMUST00000175771 639 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Mir6972-201ENSMUST00000184774 64 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm28546-201ENSMUST00000188221 615 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm5575-201ENSMUST00000190879 398 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm18292-201ENSMUST00000216673 919 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 AC107453.3-201ENSMUST00000228205 639 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Gm1982-201ENSMUST00000188615 1887 ntBASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Nup88Q8CEC0 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Gm37978-201ENSMUST00000194736 2915 ntBASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Nup88Q8CEC0 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm22271-201ENSMUST00000104035 128 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm14645-201ENSMUST00000118597 417 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Snhg7-201ENSMUST00000181621 139 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm42767-201ENSMUST00000198583 632 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm42489-201ENSMUST00000198964 669 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm42558-201ENSMUST00000200982 265 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm5586-201ENSMUST00000206264 795 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm6579-201ENSMUST00000208224 865 ntBASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nup88Q8CEC0 AC132587.1-201ENSMUST00000220562 166 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms