Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm17157-201ENSMUST00000172397 348 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm5327-201ENSMUST00000182864 1009 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm9729-201ENSMUST00000196364 265 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm17979-201ENSMUST00000196646 611 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm7210-201ENSMUST00000209309 1067 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm10054-201ENSMUST00000223362 431 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 AC126805.1-201ENSMUST00000225142 262 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 AC167013.6-201ENSMUST00000226587 1067 ntBASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9□□□□□ -0.97
Ccdc38Q8CDN8 AC154738.6-201ENSMUST00000227225 1352 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm25762-201ENSMUST00000103984 132 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm12517-201ENSMUST00000122082 425 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm22484-201ENSMUST00000157992 306 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm6921-201ENSMUST00000161478 435 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Mir7060-201ENSMUST00000183486 137 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm28530-201ENSMUST00000190473 577 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm37012-201ENSMUST00000194991 1078 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm43674-201ENSMUST00000196313 791 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm6522-201ENSMUST00000197160 1203 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Ighv8-16-201ENSMUST00000199258 294 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm44561-201ENSMUST00000208869 264 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 AC132587.1-201ENSMUST00000220562 166 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Klf10-202ENSMUST00000226363 2917 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Ccdc38Q8CDN8 Gm43322-201ENSMUST00000196232 1612 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Zfp180-202ENSMUST00000203854 3845 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm14227-201ENSMUST00000119431 629 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm18828-201ENSMUST00000180475 857 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm27043-201ENSMUST00000182807 958 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 AC134607.1-201ENSMUST00000214707 485 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccdc38Q8CDN8 Gm19810-201ENSMUST00000218521 251 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms