Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Pla2g4c-ps-201ENSMUST00000204668 1364 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm26705-201ENSMUST00000180761 1457 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Il1f5-202ENSMUST00000114490 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm20694-201ENSMUST00000176943 404 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm42824-201ENSMUST00000199361 247 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm30781-201ENSMUST00000204743 216 ntTSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm18114-201ENSMUST00000221780 523 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm5789-201ENSMUST00000222643 865 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Hmgb1P63158 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm16487-201ENSMUST00000105048 4037 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm14988-201ENSMUST00000117224 1548 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm6820-201ENSMUST00000188803 2173 ntBASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Hmgb1P63158 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Hmgb1P63158 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm38110-201ENSMUST00000194594 1551 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm14016-201ENSMUST00000119095 486 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm8682-201ENSMUST00000121310 498 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 n-R5s43-201ENSMUST00000122739 110 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 H2afy3-201ENSMUST00000151919 1112 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Zfp419-201ENSMUST00000173446 916 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm20451-201ENSMUST00000173452 273 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm42698-201ENSMUST00000197790 762 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm42628-201ENSMUST00000198498 764 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 AC157570.2-201ENSMUST00000219091 700 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 AC155266.1-201ENSMUST00000220762 904 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm22830-201ENSMUST00000083772 130 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm12904-201ENSMUST00000117451 1399 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms