Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cd28P31041 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cd28P31041 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cd28P31041 Gm44746-201ENSMUST00000205565 1349 ntBASIC6.92□□□□□ -1.3
Cd28P31041 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.92□□□□□ -1.3
Cd28P31041 Gm43196-201ENSMUST00000201762 2114 ntBASIC6.92□□□□□ -1.3
Cd28P31041 Gm19683-201ENSMUST00000209748 1781 ntBASIC6.92□□□□□ -1.3
Cd28P31041 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.92□□□□□ -1.3
Cd28P31041 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Cd28P31041 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Cd28P31041 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Cd28P31041 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cd28P31041 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Cd28P31041 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Cd28P31041 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Gm25545-201ENSMUST00000122673 323 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Gm16301-201ENSMUST00000161959 295 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gm16103-201ENSMUST00000163003 1279 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC6.91□□□□□ -1.3
Cd28P31041 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC6.91□□□□□ -1.3
Cd28P31041 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Gm42698-201ENSMUST00000197790 762 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gm6308-201ENSMUST00000203226 313 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gm18973-201ENSMUST00000205814 511 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Gm45900-201ENSMUST00000211879 409 ntBASIC6.91□□□□□ -1.3
Cd28P31041 AC122360.1-201ENSMUST00000217737 624 ntBASIC6.91□□□□□ -1.3
Cd28P31041 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cd28P31041 AC154595.1-201ENSMUST00000225533 1059 ntBASIC6.91□□□□□ -1.3
Cd28P31041 CT009550.1-201ENSMUST00000225750 864 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cd28P31041 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Mir25-201ENSMUST00000083460 84 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Gm16026-201ENSMUST00000094774 580 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
Cd28P31041 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.91□□□□□ -1.3
Cd28P31041 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.91□□□□□ -1.3
Cd28P31041 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cd28P31041 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Cd28P31041 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.9□□□□□ -1.3
Cd28P31041 AC124572.1-201ENSMUST00000218155 2406 ntBASIC6.9□□□□□ -1.3
Cd28P31041 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
Cd28P31041 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Cd28P31041 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC6.9□□□□□ -1.3
Cd28P31041 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC6.9□□□□□ -1.3
Cd28P31041 Gm13161-201ENSMUST00000120609 559 ntBASIC6.9□□□□□ -1.3
Cd28P31041 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC6.9□□□□□ -1.3
Cd28P31041 Gm16305-201ENSMUST00000140747 556 ntBASIC6.9□□□□□ -1.3
Cd28P31041 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cd28P31041 Gm23827-201ENSMUST00000157116 145 ntBASIC6.9□□□□□ -1.3
Cd28P31041 Ang-ps1-201ENSMUST00000162314 436 ntBASIC6.9□□□□□ -1.3
Cd28P31041 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Cd28P31041 Gm17235-201ENSMUST00000169128 964 ntBASIC6.9□□□□□ -1.3
Cd28P31041 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms