Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm12105-201ENSMUST00000120846 779 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm17258-201ENSMUST00000168462 1266 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm7734-201ENSMUST00000182832 1011 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm28645-201ENSMUST00000185859 564 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm28918-201ENSMUST00000188822 699 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm42525-201ENSMUST00000196257 527 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm42429-201ENSMUST00000198579 558 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm5981-201ENSMUST00000199912 487 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm8686-201ENSMUST00000203028 388 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 AC152946.3-201ENSMUST00000219424 280 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 AC123058.1-201ENSMUST00000223748 437 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 AC142114.1-201ENSMUST00000227724 328 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Fabp5l2-201ENSMUST00000072582 408 ntBASIC7.7□□□□□ -1.18
Clrn1Q8K445 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Clrn1Q8K445 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Clrn1Q8K445 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm5442-201ENSMUST00000202121 2034 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm5530-201ENSMUST00000117185 985 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm15028-201ENSMUST00000120295 370 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm17572-201ENSMUST00000171455 420 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm45078-201ENSMUST00000205343 546 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm39121-201ENSMUST00000208847 525 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm19810-201ENSMUST00000218521 251 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 AC162940.1-201ENSMUST00000224745 1167 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 AC154506.2-201ENSMUST00000225481 1276 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 AC114585.2-203ENSMUST00000228400 339 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm38130-201ENSMUST00000194311 1761 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.69□□□□□ -1.18
Clrn1Q8K445 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC7.69□□□□□ -1.18
Clrn1Q8K445 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms