Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15576-201ENSMUST00000117806 583 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm7910-201ENSMUST00000117896 835 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm23533-201ENSMUST00000157540 245 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm24050-201ENSMUST00000158623 290 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm38078-201ENSMUST00000192771 392 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm34701-201ENSMUST00000204213 849 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC11.28□□□□□ -0.6
Usp47Q8BY87 AC122360.1-201ENSMUST00000217737 624 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm9289-201ENSMUST00000221269 606 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 AC124103.1-201ENSMUST00000227564 1027 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Gm24696-201ENSMUST00000083878 134 ntBASIC11.28□□□□□ -0.6
Usp47Q8BY87 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp47Q8BY87 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp47Q8BY87 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC11.27□□□□□ -0.6
Usp47Q8BY87 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm28427-201ENSMUST00000190144 2162 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm38072-201ENSMUST00000192127 2162 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Xpo7-206ENSMUST00000228346 4491 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 n-R5s1-201ENSMUST00000101925 119 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm11809-201ENSMUST00000120923 950 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Mir7058-201ENSMUST00000184637 75 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm8304-201ENSMUST00000185744 584 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm28980-201ENSMUST00000187877 219 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm4545-201ENSMUST00000190797 603 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp47Q8BY87 AC153561.1-201ENSMUST00000215943 469 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Vmn1r41-204ENSMUST00000227039 985 ntBASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp47Q8BY87 Gm37334-201ENSMUST00000192325 2938 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Dennd6a-205ENSMUST00000224378 2424 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm43747-201ENSMUST00000201412 1330 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Usp47Q8BY87 CT009711.1-201ENSMUST00000223992 3040 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm13526-201ENSMUST00000117970 189 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm24738-201ENSMUST00000158856 123 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm6838-201ENSMUST00000172851 582 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm5973-201ENSMUST00000178542 496 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm29144-201ENSMUST00000189235 339 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm29238-201ENSMUST00000189709 695 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm28607-201ENSMUST00000190142 339 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm28121-201ENSMUST00000191420 339 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Olfr471-201ENSMUST00000210091 936 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm45888-201ENSMUST00000212348 1229 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 CT572999.1-201ENSMUST00000220315 1260 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Gm44531-201ENSMUST00000208364 2000 ntBASIC11.26□□□□□ -0.61
Usp47Q8BY87 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp47Q8BY87 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms