Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.13□□□□□ -1.11
RxraP28700 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC8.13□□□□□ -1.11
RxraP28700 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.13□□□□□ -1.11
RxraP28700 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm43792-201ENSMUST00000202492 2210 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm43080-201ENSMUST00000199006 2643 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 Gm12455-201ENSMUST00000121242 416 ntBASIC8.13□□□□□ -1.11
RxraP28700 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC8.13□□□□□ -1.11
RxraP28700 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
RxraP28700 Gm17572-201ENSMUST00000171455 420 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm17157-201ENSMUST00000172397 348 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC8.13□□□□□ -1.11
RxraP28700 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
RxraP28700 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
RxraP28700 Gm18353-201ENSMUST00000185906 784 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm42429-201ENSMUST00000198579 558 ntBASIC8.13□□□□□ -1.11
RxraP28700 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 Gm6579-201ENSMUST00000208224 865 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm39121-201ENSMUST00000208847 525 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 CT010431.1-201ENSMUST00000221249 1080 ntBASIC8.13□□□□□ -1.11
RxraP28700 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 AC154747.2-201ENSMUST00000225109 780 ntBASIC8.13□□□□□ -1.11
RxraP28700 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.13□□□□□ -1.11
RxraP28700 AC114585.2-203ENSMUST00000228400 339 ntBASIC8.13□□□□□ -1.11
RxraP28700 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm8394-201ENSMUST00000079684 952 ntBASIC8.13□□□□□ -1.11
RxraP28700 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RxraP28700 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.13□□□□□ -1.11
RxraP28700 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 Gm5442-201ENSMUST00000202121 2034 ntBASIC8.13□□□□□ -1.11
RxraP28700 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm18359-201ENSMUST00000173024 1459 ntBASIC8.13□□□□□ -1.11
RxraP28700 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RxraP28700 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
RxraP28700 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RxraP28700 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.13□□□□□ -1.11
RxraP28700 Gm37150-201ENSMUST00000193900 2754 ntBASIC8.12□□□□□ -1.11
RxraP28700 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Gm9105-201ENSMUST00000120160 1398 ntBASIC8.12□□□□□ -1.11
RxraP28700 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
RxraP28700 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
RxraP28700 Gm25501-201ENSMUST00000104429 132 ntBASIC8.12□□□□□ -1.11
RxraP28700 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC8.12□□□□□ -1.11
RxraP28700 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RxraP28700 Gm6695-201ENSMUST00000177264 1172 ntBASIC8.12□□□□□ -1.11
RxraP28700 Gm7191-201ENSMUST00000182678 990 ntBASIC8.12□□□□□ -1.11
RxraP28700 Gm38226-201ENSMUST00000192207 521 ntBASIC8.12□□□□□ -1.11
RxraP28700 Gm37450-201ENSMUST00000195218 170 ntBASIC8.12□□□□□ -1.11
RxraP28700 Mark4-ps-201ENSMUST00000196140 384 ntBASIC8.12□□□□□ -1.11
RxraP28700 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.12□□□□□ -1.11
RxraP28700 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.12□□□□□ -1.11
RxraP28700 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC8.12□□□□□ -1.11
RxraP28700 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Cacna2d3-208ENSMUST00000225985 918 ntBASIC8.12□□□□□ -1.11
RxraP28700 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RxraP28700 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
RxraP28700 Gm43314-201ENSMUST00000196744 2231 ntBASIC8.12□□□□□ -1.11
RxraP28700 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms