Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm42897-201ENSMUST00000201486 2112 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Lrit1-201ENSMUST00000120052 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm44062-201ENSMUST00000203312 4857 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm25757-201ENSMUST00000103986 123 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm25276-201ENSMUST00000104300 124 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm25344-201ENSMUST00000104503 132 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm15709-201ENSMUST00000118354 213 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm16523-201ENSMUST00000121253 592 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm7481-201ENSMUST00000182020 995 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm6522-201ENSMUST00000197160 1203 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm44937-201ENSMUST00000207705 2691 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Jam2-202ENSMUST00000114195 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a6B1AVK5 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Gle1-201ENSMUST00000019859 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Gm42519-201ENSMUST00000199282 3656 ntBASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.15□□□□□ -1.11
Col4a6B1AVK5 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Cep63-206ENSMUST00000162655 4180 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.15□□□□□ -1.11
Col4a6B1AVK5 AC107452.3-201ENSMUST00000228807 1308 ntBASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC8.15□□□□□ -1.11
Col4a6B1AVK5 Gm26419-201ENSMUST00000104272 133 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm29464-201ENSMUST00000187692 513 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 CT009711.2-202ENSMUST00000224538 973 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Gm6368-201ENSMUST00000119727 2147 ntBASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col4a6B1AVK5 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms