Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Usp54Q8BL06 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC11.27□□□□□ -0.61
Usp54Q8BL06 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp54Q8BL06 AC160340.1-201ENSMUST00000222952 3964 ntBASIC11.27□□□□□ -0.61
Usp54Q8BL06 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp54Q8BL06 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm42897-201ENSMUST00000201486 2112 ntBASIC11.26□□□□□ -0.61
Usp54Q8BL06 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm27034-201ENSMUST00000182552 940 ntBASIC11.26□□□□□ -0.61
Usp54Q8BL06 Mir7212-201ENSMUST00000184098 61 ntBASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm34701-201ENSMUST00000204213 849 ntBASIC11.26□□□□□ -0.61
Usp54Q8BL06 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Btrc-206ENSMUST00000224102 3037 ntBASIC11.26□□□□□ -0.61
Usp54Q8BL06 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Dgcr2-202ENSMUST00000066127 3790 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp54Q8BL06 Gm44228-201ENSMUST00000204888 2026 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm43023-201ENSMUST00000197583 2106 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Mmrn2-201ENSMUST00000111908 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm24893-201ENSMUST00000122745 369 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm9652-201ENSMUST00000209345 163 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 CT009711.2-202ENSMUST00000224538 973 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 AC157572.1-201ENSMUST00000227187 825 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm25926-201ENSMUST00000082899 160 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Cblb-205ENSMUST00000227756 3378 ntBASIC11.25□□□□□ -0.61
Usp54Q8BL06 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp54Q8BL06 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp54Q8BL06 n-R5s172-201ENSMUST00000104508 114 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm13444-201ENSMUST00000119445 522 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm18501-201ENSMUST00000185363 664 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm18980-201ENSMUST00000199098 1079 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 AC125087.1-201ENSMUST00000227552 514 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm38123-201ENSMUST00000194990 2779 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm23701-201ENSMUST00000103893 110 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Mir8094-201ENSMUST00000183361 117 ntBASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Usp54Q8BL06 Gm5654-201ENSMUST00000217787 475 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms