Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm45718-201ENSMUST00000207577 3794 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm27034-201ENSMUST00000182552 940 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Mir6357-201ENSMUST00000184246 104 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm9419-201ENSMUST00000200672 567 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm43849-201ENSMUST00000201086 215 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm42883-201ENSMUST00000202594 222 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm2398-201ENSMUST00000218347 883 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm25926-201ENSMUST00000082899 160 ntBASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a6B1AVK5 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm44090-201ENSMUST00000204669 1834 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm11726-201ENSMUST00000121028 424 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm18501-201ENSMUST00000185363 664 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm42424-201ENSMUST00000198319 376 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Cblb-205ENSMUST00000227756 3378 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Gm37995-201ENSMUST00000194958 1714 ntBASIC8.16□□□□□ -1.1
Col4a6B1AVK5 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms