Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 AC112680.1-201ENSMUST00000215435 1349 ntBASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Trim42-201ENSMUST00000035026 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup88Q8CEC0 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm42981-201ENSMUST00000200184 3252 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm22268-201ENSMUST00000104009 131 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm25502-201ENSMUST00000104428 131 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm12987-201ENSMUST00000118562 489 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm11901-201ENSMUST00000120412 437 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm15062-201ENSMUST00000120567 367 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm16276-201ENSMUST00000131218 262 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm26048-201ENSMUST00000157305 142 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm17138-201ENSMUST00000165702 459 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm17258-201ENSMUST00000168462 1266 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm7393-201ENSMUST00000172650 739 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Mir6912-201ENSMUST00000184456 70 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Scgb2b30-201ENSMUST00000187013 336 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm18351-201ENSMUST00000188646 883 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Scgb2b10-201ENSMUST00000191403 318 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm42959-201ENSMUST00000202184 212 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 AC154603.2-201ENSMUST00000223896 577 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Spag11a-201ENSMUST00000058955 436 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm44001-201ENSMUST00000203158 3773 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm12430-201ENSMUST00000121539 1322 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm8107-201ENSMUST00000117477 2009 ntBASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nup88Q8CEC0 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Nup88Q8CEC0 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Nup88Q8CEC0 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup88Q8CEC0 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup88Q8CEC0 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup88Q8CEC0 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nup88Q8CEC0 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm7831-201ENSMUST00000117990 552 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm11875-201ENSMUST00000118187 799 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm13500-201ENSMUST00000119348 824 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm24748-201ENSMUST00000157836 108 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm25265-201ENSMUST00000158520 347 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm6921-201ENSMUST00000161478 435 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm17097-201ENSMUST00000166414 714 ntBASIC9.52□□□□□ -0.89
Nup88Q8CEC0 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC9.52□□□□□ -0.89
Nup88Q8CEC0 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms