Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 AIRN-201ENST00000601203 4374 ntBASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSM5Q9Y4Y9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 KRT18P24-201ENST00000344739 1156 ntBASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSM5Q9Y4Y9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 AC026471.6-201ENST00000622954 1905 ntBASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.46■□□□□ 0.39
LSM5Q9Y4Y9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LSM5Q9Y4Y9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
LSM5Q9Y4Y9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
LSM5Q9Y4Y9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
LSM5Q9Y4Y9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 SNX5-217ENST00000606557 1087 ntBASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LSM5Q9Y4Y9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LSM5Q9Y4Y9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms