Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn5Q9WVD4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Clcn5Q9WVD4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
Clcn5Q9WVD4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clcn5Q9WVD4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.39■□□□□ 0.69
Clcn5Q9WVD4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clcn5Q9WVD4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn5Q9WVD4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn5Q9WVD4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn5Q9WVD4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.38■□□□□ 0.69
Clcn5Q9WVD4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.38■□□□□ 0.69
Clcn5Q9WVD4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clcn5Q9WVD4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Gm5643-201ENSMUST00000117081 966 ntBASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcn5Q9WVD4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.36■□□□□ 0.69
Clcn5Q9WVD4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcn5Q9WVD4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.34■□□□□ 0.69
Clcn5Q9WVD4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn5Q9WVD4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn5Q9WVD4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn5Q9WVD4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Clcn5Q9WVD4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn5Q9WVD4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcn5Q9WVD4 Gm27275-201ENSMUST00000184318 272 ntBASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcn5Q9WVD4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Gm715-201ENSMUST00000117865 831 ntBASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcn5Q9WVD4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcn5Q9WVD4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms