Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Gm13241-201ENSMUST00000094493 780 ntBASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1aQ9QWF0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chaf1aQ9QWF0 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chaf1aQ9QWF0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chaf1aQ9QWF0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Chaf1aQ9QWF0 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.89■□□□□ 0.94
Chaf1aQ9QWF0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.89■□□□□ 0.94
Chaf1aQ9QWF0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chaf1aQ9QWF0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.89■□□□□ 0.94
Chaf1aQ9QWF0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Mir7075-201ENSMUST00000184187 82 ntBASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Chaf1aQ9QWF0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chaf1aQ9QWF0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chaf1aQ9QWF0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chaf1aQ9QWF0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Chaf1aQ9QWF0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms