Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf225Q9D7D1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.7■□□□□ 0.74
Rnf225Q9D7D1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf225Q9D7D1 AC154634.3-201ENSMUST00000224589 736 ntBASIC19.7■□□□□ 0.74
Rnf225Q9D7D1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf225Q9D7D1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.7■□□□□ 0.74
Rnf225Q9D7D1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
Rnf225Q9D7D1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Gm13234-201ENSMUST00000120010 747 ntBASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf225Q9D7D1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Gm10493-201ENSMUST00000097270 612 ntBASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf225Q9D7D1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf225Q9D7D1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf225Q9D7D1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf225Q9D7D1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf225Q9D7D1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.63■□□□□ 0.73
Rnf225Q9D7D1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf225Q9D7D1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf225Q9D7D1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rnf225Q9D7D1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf225Q9D7D1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf225Q9D7D1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf225Q9D7D1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms