Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Snf8Q9CZ28 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snf8Q9CZ28 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Snf8Q9CZ28 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Snf8Q9CZ28 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snf8Q9CZ28 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snf8Q9CZ28 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.27■□□□□ 0.68
Snf8Q9CZ28 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snf8Q9CZ28 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Snf8Q9CZ28 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
Snf8Q9CZ28 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Snf8Q9CZ28 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Snf8Q9CZ28 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Snf8Q9CZ28 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Snf8Q9CZ28 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Snf8Q9CZ28 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snf8Q9CZ28 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snf8Q9CZ28 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.24■□□□□ 0.67
Snf8Q9CZ28 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Snf8Q9CZ28 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Snf8Q9CZ28 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snf8Q9CZ28 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snf8Q9CZ28 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.21■□□□□ 0.67
Snf8Q9CZ28 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snf8Q9CZ28 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snf8Q9CZ28 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snf8Q9CZ28 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snf8Q9CZ28 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
Snf8Q9CZ28 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snf8Q9CZ28 Gm7860-201ENSMUST00000121190 879 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms