Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1aQ9CU62 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Smc1aQ9CU62 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc1aQ9CU62 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc1aQ9CU62 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc1aQ9CU62 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc1aQ9CU62 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Smc1aQ9CU62 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc1aQ9CU62 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc1aQ9CU62 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc1aQ9CU62 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Gm27801-201ENSMUST00000184174 223 ntBASIC20.82■□□□□ 0.92
Smc1aQ9CU62 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.82■□□□□ 0.92
Smc1aQ9CU62 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.82■□□□□ 0.92
Smc1aQ9CU62 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc1aQ9CU62 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Reep4-203ENSMUST00000226563 1444 ntBASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc1aQ9CU62 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc1aQ9CU62 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc1aQ9CU62 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1aQ9CU62 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc1aQ9CU62 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms