Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Odf4Q8VI88 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Gm27405-201ENSMUST00000184201 112 ntBASIC16.68■□□□□ 0.26
Odf4Q8VI88 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.68■□□□□ 0.26
Odf4Q8VI88 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Odf4Q8VI88 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Odf4Q8VI88 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Odf4Q8VI88 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.66■□□□□ 0.26
Odf4Q8VI88 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Odf4Q8VI88 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.65■□□□□ 0.26
Odf4Q8VI88 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Gm9988-201ENSMUST00000069786 435 ntBASIC16.65■□□□□ 0.26
Odf4Q8VI88 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Odf4Q8VI88 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Odf4Q8VI88 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Odf4Q8VI88 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Odf4Q8VI88 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Odf4Q8VI88 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Odf4Q8VI88 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Odf4Q8VI88 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Odf4Q8VI88 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms