Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgcs1Q8JZK9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Gm26833-201ENSMUST00000180899 440 ntBASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgcs1Q8JZK9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgcs1Q8JZK9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgcs1Q8JZK9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcs1Q8JZK9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcs1Q8JZK9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcs1Q8JZK9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgcs1Q8JZK9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.83■□□□□ 0.44
Hmgcs1Q8JZK9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hmgcs1Q8JZK9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcs1Q8JZK9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcs1Q8JZK9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcs1Q8JZK9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmgcs1Q8JZK9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hmgcs1Q8JZK9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgcs1Q8JZK9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hmgcs1Q8JZK9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgcs1Q8JZK9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hmgcs1Q8JZK9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgcs1Q8JZK9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgcs1Q8JZK9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmgcs1Q8JZK9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms