Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb7Q8CDY9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb7Q8CDY9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb7Q8CDY9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhb7Q8CDY9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Pcdhb7Q8CDY9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb7Q8CDY9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb7Q8CDY9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb7Q8CDY9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb7Q8CDY9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb7Q8CDY9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms