Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Gm6345-202ENSMUST00000180900 204 ntBASIC16.05■□□□□ 0.16
Smg1Q8BKX6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smg1Q8BKX6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Gm23634-201ENSMUST00000175071 91 ntBASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Gm7889-201ENSMUST00000185591 958 ntBASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smg1Q8BKX6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Gm21814-202ENSMUST00000203277 873 ntBASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smg1Q8BKX6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smg1Q8BKX6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smg1Q8BKX6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smg1Q8BKX6 Gm33142-201ENSMUST00000193913 867 ntBASIC16.02■□□□□ 0.16
Smg1Q8BKX6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smg1Q8BKX6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smg1Q8BKX6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smg1Q8BKX6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Smg1Q8BKX6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
Smg1Q8BKX6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smg1Q8BKX6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smg1Q8BKX6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smg1Q8BKX6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16■□□□□ 0.15
Smg1Q8BKX6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Smg1Q8BKX6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Smg1Q8BKX6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16■□□□□ 0.15
Smg1Q8BKX6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Smg1Q8BKX6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smg1Q8BKX6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smg1Q8BKX6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smg1Q8BKX6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smg1Q8BKX6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smg1Q8BKX6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 AA386476-201ENSMUST00000098781 1665 ntBASIC15.99■□□□□ 0.15
Smg1Q8BKX6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smg1Q8BKX6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms