Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp2bQ8BJF9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp2bQ8BJF9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Gm21956-201ENSMUST00000179946 522 ntBASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp2bQ8BJF9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chmp2bQ8BJF9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.1■□□□□ 0.65
Chmp2bQ8BJF9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp2bQ8BJF9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Chmp2bQ8BJF9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2bQ8BJF9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2bQ8BJF9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2bQ8BJF9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2bQ8BJF9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms