Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Tdp1Q8BJ37 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tdp1Q8BJ37 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tdp1Q8BJ37 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tdp1Q8BJ37 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tdp1Q8BJ37 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tdp1Q8BJ37 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tdp1Q8BJ37 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tdp1Q8BJ37 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tdp1Q8BJ37 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Gm715-201ENSMUST00000117865 831 ntBASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tdp1Q8BJ37 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tdp1Q8BJ37 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.7■□□□□ 0.9
Tdp1Q8BJ37 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.7■□□□□ 0.9
Tdp1Q8BJ37 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Gm15378-201ENSMUST00000121894 207 ntBASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tdp1Q8BJ37 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Gm13158-201ENSMUST00000122007 736 ntBASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tdp1Q8BJ37 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tdp1Q8BJ37 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms