Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh20Q8BIZ0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Gm5874-201ENSMUST00000096101 508 ntBASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh20Q8BIZ0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Gm10493-201ENSMUST00000097270 612 ntBASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.22■□□□□ 0.51
Pcdh20Q8BIZ0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 AA386476-201ENSMUST00000098781 1665 ntBASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdh20Q8BIZ0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdh20Q8BIZ0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh20Q8BIZ0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh20Q8BIZ0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh20Q8BIZ0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms