Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Rnf38Q8BI21 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf38Q8BI21 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf38Q8BI21 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf38Q8BI21 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Gm45417-201ENSMUST00000209533 758 ntBASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf38Q8BI21 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf38Q8BI21 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.02■□□□□ 0.48
Rnf38Q8BI21 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf38Q8BI21 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf38Q8BI21 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf38Q8BI21 Mir7075-201ENSMUST00000184187 82 ntBASIC18.02■□□□□ 0.48
Rnf38Q8BI21 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf38Q8BI21 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf38Q8BI21 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf38Q8BI21 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf38Q8BI21 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf38Q8BI21 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Smad6-203ENSMUST00000179458 273 ntBASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf38Q8BI21 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms