Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim23Q8BGX0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim23Q8BGX0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim23Q8BGX0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim23Q8BGX0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Trim23Q8BGX0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim23Q8BGX0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.08■□□□□ 0.48
Trim23Q8BGX0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim23Q8BGX0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim23Q8BGX0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim23Q8BGX0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.06■□□□□ 0.48
Trim23Q8BGX0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim23Q8BGX0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Gm13148-201ENSMUST00000118892 745 ntBASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.04■□□□□ 0.48
Trim23Q8BGX0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim23Q8BGX0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Gm10602-201ENSMUST00000098239 609 ntBASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim23Q8BGX0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.02■□□□□ 0.48
Trim23Q8BGX0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trim23Q8BGX0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trim23Q8BGX0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim23Q8BGX0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim23Q8BGX0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms