Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smndc1Q8BGT7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Smndc1Q8BGT7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smndc1Q8BGT7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smndc1Q8BGT7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smndc1Q8BGT7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smndc1Q8BGT7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smndc1Q8BGT7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Gm45417-201ENSMUST00000209533 758 ntBASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.05■□□□□ 0.48
Smndc1Q8BGT7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms